Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2835 | Not Available | Positive | 2929202 - 2929387 | 7131.56 |
| tonb-dependent receptor | A33Q_2836 | Not Available | Negative | 2929625 - 2931754 | 79040.8 |
| cytochrome c551/c552 | A33Q_2837 | Not Available | Negative | 2931870 - 2934542 | 100979.0 |
| hypothetical protein | A33Q_2838 | Not Available | Negative | 2934682 - 2935260 | 21436.8 |
| peptide methionine sulfoxide reductase msra | A33Q_2839 | Not Available | Positive | 2935542 - 2936618 | 40541.0 |
| alkylated dna repair protein alkb | A33Q_2840 | Not Available | Negative | 2936974 - 2937579 | 23551.3 |
| hypothetical protein | A33Q_2841 | Not Available | Positive | 2937690 - 2938100 | 15336.2 |
| hypothetical protein | A33Q_2842 | Not Available | Negative | 2938358 - 2938777 | 15815.1 |
| penicillin acylase (penicillin amidase) | A33Q_2843 | Not Available | Positive | 2938915 - 2941350 | 93137.0 |
| rhodanese-like domain protein | A33Q_2844 | Not Available | Negative | 2941435 - 2941770 | 12617.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
