Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | A33Q_2825 | Not Available | Negative | 2918915 - 2920045 | 42264.5 |
| flagellar motor rotation protein motb | A33Q_2826 | Not Available | Positive | 2920177 - 2921022 | 31579.7 |
| phopq-activated pathogenicity-related protein | A33Q_2827 | Not Available | Negative | 2921094 - 2922545 | 55596.7 |
| hypothetical protein | A33Q_2828 | Not Available | Negative | 2922791 - 2925502 | 100169.0 |
| hypothetical protein | A33Q_2829 | Not Available | Negative | 2925638 - 2925757 | 4526.01 |
| dienelactone hydrolase-related protein | A33Q_2830 | Not Available | Positive | 2925714 - 2926577 | 32026.6 |
| putative type iis restriction/modification enzyme | A33Q_2831 | Not Available | Positive | 2926878 - 2927030 | 5855.3 |
| hypothetical protein | A33Q_2832 | Not Available | Positive | 2927054 - 2927968 | 35365.5 |
| hypothetical protein | A33Q_2833 | Not Available | Positive | 2928176 - 2928715 | 20473.7 |
| helix-turn-helix motif protein | A33Q_2834 | Not Available | Positive | 2928726 - 2929115 | 14660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
