Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | A33Q_2785 | Not Available | Positive | 2875931 - 2876377 | 16835.3 |
| two-component hybrid sensor and regulator | A33Q_2786 | Not Available | Positive | 2876374 - 2877387 | 39010.9 |
| response regulator | A33Q_2787 | Not Available | Positive | 2877384 - 2877785 | 15033.4 |
| hypothetical protein | A33Q_2788 | Not Available | Negative | 2877834 - 2878613 | 27824.9 |
| transcriptional regulator | A33Q_2789 | Not Available | Negative | 2878689 - 2879561 | 33932.8 |
| d-beta-hydroxybutyrate dehydrogenase | A33Q_2790 | Not Available | Positive | 2880106 - 2880858 | 26842.3 |
| fumarylacetoacetate hydrolase family protein | A33Q_2791 | Not Available | Positive | 2881008 - 2881859 | 31240.4 |
| l-fuconolactone hydrolase | A33Q_2792 | Not Available | Positive | 2881885 - 2882715 | 32044.1 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | A33Q_2793 | Not Available | Positive | 2882722 - 2883507 | 28503.0 |
| fucose permease | A33Q_2794 | Not Available | Positive | 2883576 - 2884871 | 47396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
