Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas2 | A33Q_2775 | Not Available | Negative | 2857346 - 2857693 | 13635.6 |
| crispr-associated protein cas1 | A33Q_2776 | Not Available | Negative | 2857686 - 2858582 | 33635.5 |
| hypothetical protein | A33Q_2777 | Not Available | Negative | 2858663 - 2859253 | 23631.0 |
| hypothetical protein | A33Q_2778 | Not Available | Negative | 2859244 - 2859411 | 6664.97 |
| crispr-associated protein, csn1 family | A33Q_2779 | Not Available | Negative | 2859573 - 2863637 | 156903.0 |
| peptidyl-prolyl cis-trans isomerase, cyclophilin-type | A33Q_2780 | Not Available | Positive | 2863899 - 2864480 | 21629.9 |
| signal transduction histidine kinase | A33Q_2781 | Not Available | Positive | 2864540 - 2868898 | 165698.0 |
| putative oxidoreductase | A33Q_2782 | Not Available | Positive | 2868907 - 2869989 | 39939.9 |
| phytochrome, two-component sensor histidine kinase | A33Q_2783 | Not Available | Positive | 2870153 - 2873836 | 141885.0 |
| phytochrome, two-component sensor histidine kinase | A33Q_2784 | Not Available | Positive | 2873840 - 2875852 | 77597.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
