Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | A33Q_2713 | Not Available | Negative | 2803739 - 2804161 | 16713.8 |
| serine-protein kinase rsbw | A33Q_2714 | Not Available | Negative | 2804164 - 2804394 | 8763.32 |
| exodeoxyribonuclease iii | A33Q_2715 | Not Available | Negative | 2804599 - 2805363 | 29513.8 |
| hypothetical protein | A33Q_2716 | Not Available | Negative | 2805394 - 2805756 | 14219.4 |
| hypothetical protein | A33Q_2717 | Not Available | Negative | 2805749 - 2806105 | 13551.4 |
| competence protein f-like protein | A33Q_2718 | Not Available | Positive | 2806243 - 2806881 | 23983.4 |
| beta-propeller domains of methanol dehydrogenase type | A33Q_2719 | Not Available | Negative | 2807037 - 2807852 | 29136.0 |
| hypothetical protein | A33Q_2720 | Not Available | Negative | 2807856 - 2808290 | 16246.3 |
| lema family protein | A33Q_2721 | Not Available | Negative | 2808296 - 2808886 | 22108.0 |
| histidine kinase sensor protein | A33Q_2722 | Not Available | Negative | 2808948 - 2812259 | 127715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
