Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2703 | Not Available | Negative | 2791627 - 2791983 | 13588.5 |
| 3-ketoacyl-coa thiolase | A33Q_2704 | Not Available | Negative | 2792112 - 2793287 | 41924.8 |
| hypothetical protein | A33Q_2705 | Not Available | Negative | 2793387 - 2793542 | 5765.74 |
| hypothetical protein | A33Q_2706 | Not Available | Negative | 2793573 - 2793755 | 6827.3 |
| enoyl-coa hydratase | A33Q_2707 | Not Available | Negative | 2793812 - 2796217 | 89680.2 |
| transcriptional regulator, marr family | A33Q_2708 | Not Available | Negative | 2796238 - 2796654 | 15978.3 |
| long-chain-fatty-acid--coa ligase | A33Q_2709 | Not Available | Negative | 2796917 - 2798677 | 66716.3 |
| hypothetical protein | A33Q_2710 | Not Available | Negative | 2799142 - 2800827 | 64778.6 |
| sam-dependent methyltransferase | A33Q_2711 | Not Available | Negative | 2800899 - 2801801 | 34786.1 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | A33Q_2712 | Not Available | Negative | 2801801 - 2803666 | 69939.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
