Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine ketoglutarate reductase (lor) (lkr) | A33Q_2693 | Not Available | Positive | 2780621 - 2781835 | 46004.7 |
| deoxyribose-phosphate aldolase | A33Q_2694 | Not Available | Positive | 2781924 - 2782580 | 23952.9 |
| sodium-dependent phosphate transporter | A33Q_2695 | Not Available | Negative | 2782693 - 2783874 | 43422.1 |
| hypothetical protein | A33Q_2696 | Not Available | Positive | 2784203 - 2785342 | 43068.4 |
| pp_02672 | A33Q_2697 | Not Available | Positive | 2785421 - 2785858 | Not Available |
| manganese superoxide dismutase | A33Q_2698 | Not Available | Positive | 2785963 - 2786568 | 22172.8 |
| tonb-dependent receptor | A33Q_2699 | Not Available | Positive | 2786812 - 2789244 | 90932.6 |
| hypothetical protein | A33Q_2700 | Not Available | Negative | 2789408 - 2789551 | 5163.46 |
| hypothetical protein | A33Q_2701 | Not Available | Positive | 2789540 - 2789680 | 5293.37 |
| butyryl-coa dehydrogenase | A33Q_2702 | Not Available | Negative | 2789764 - 2791563 | 65879.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
