Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase | A33Q_2683 | Not Available | Positive | 2771821 - 2773014 | 45365.7 |
| putative integral membrane protein | A33Q_2684 | Not Available | Positive | 2773095 - 2773529 | 16178.2 |
| hypothetical protein | A33Q_2685 | Not Available | Positive | 2773532 - 2774275 | 28152.8 |
| inosine-5'-monophosphate dehydrogenase | A33Q_2686 | Not Available | Positive | 2774414 - 2775892 | 52934.2 |
| nucleoside diphosphate kinase | A33Q_2687 | Not Available | Negative | 2776090 - 2776512 | 15275.2 |
| 3'-to-5' oligoribonuclease a | A33Q_2688 | Not Available | Positive | 2776704 - 2777744 | 38853.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa precursor | A33Q_2689 | Not Available | Positive | 2777752 - 2778669 | 33769.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | A33Q_2690 | Not Available | Positive | 2778656 - 2779234 | 21561.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | A33Q_2691 | Not Available | Positive | 2779234 - 2779773 | 20294.1 |
| hypothetical protein | A33Q_2692 | Not Available | Negative | 2779817 - 2780413 | 22836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
