Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0254 | Not Available | Negative | 254973 - 255452 | 18305.8 |
| na+/h+ antiporter | A33Q_0255 | Not Available | Negative | 255681 - 256922 | 44965.6 |
| hypothetical protein | A33Q_0256 | Not Available | Negative | 256932 - 257762 | 30876.1 |
| hypothetical protein | A33Q_0257 | Not Available | Positive | 258002 - 259618 | 59969.0 |
| peptidase m14, carboxypeptidase a | A33Q_0258 | Not Available | Positive | 259630 - 261378 | 66221.7 |
| thioredoxin | A33Q_0259 | Not Available | Negative | 261435 - 261647 | 8055.13 |
| tonb-dependent receptor | A33Q_0260 | Not Available | Negative | 261939 - 264392 | 94831.5 |
| hypothetical protein | A33Q_0261 | Not Available | Negative | 264379 - 265368 | 37905.9 |
| hypothetical protein | A33Q_0262 | Not Available | Negative | 265463 - 265942 | 17439.2 |
| hypothetical protein | A33Q_0263 | Not Available | Negative | 266072 - 266830 | 29663.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
