Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moxr-like atpase in aerotolerance operon | A33Q_2663 | Not Available | Positive | 2747648 - 2748619 | 36646.6 |
| tonb-dependent receptor | A33Q_2664 | Not Available | Positive | 2748809 - 2751622 | 105930.0 |
| hypothetical protein | A33Q_2665 | Not Available | Positive | 2751662 - 2753272 | 58467.5 |
| hypothetical protein | A33Q_2666 | Not Available | Positive | 2753350 - 2753925 | 22436.8 |
| tonb-dependent receptor | A33Q_2667 | Not Available | Negative | 2754366 - 2756612 | 83727.0 |
| hypothetical protein | A33Q_2668 | Not Available | Positive | 2756611 - 2756748 | 5206.49 |
| hypothetical protein | A33Q_2669 | Not Available | Positive | 2756844 - 2757398 | 20607.7 |
| glucose-methanol-choline (gmc) oxidoreductase:nad binding site | A33Q_2670 | Not Available | Positive | 2757644 - 2759095 | 54536.3 |
| hypothetical protein | A33Q_2671 | Not Available | Positive | 2759549 - 2762041 | 93809.9 |
| tonb-dependent receptor | A33Q_2672 | Not Available | Positive | 2762280 - 2763515 | 47725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
