Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | A33Q_2643 | Not Available | Negative | 2719371 - 2721602 | 85692.3 |
| hypothetical protein | A33Q_2644 | Not Available | Positive | 2721781 - 2722812 | 39268.1 |
| beta-lactamase | A33Q_2645 | Not Available | Positive | 2722833 - 2724026 | 44459.9 |
| protein of unknown function duf11 | A33Q_2646 | Not Available | Positive | 2724037 - 2728617 | 163679.0 |
| hypothetical protein | A33Q_2647 | Not Available | Positive | 2728699 - 2729157 | 17611.8 |
| beta-lactamase | A33Q_2648 | Not Available | Positive | 2729185 - 2730357 | 43182.5 |
| hypothetical protein | A33Q_2649 | Not Available | Positive | 2730610 - 2731287 | 24349.5 |
| sigma-70 region 2 domain protein | A33Q_2650 | Not Available | Positive | 2731337 - 2731927 | 23460.8 |
| hypothetical protein | A33Q_2651 | Not Available | Positive | 2731932 - 2732672 | 28137.1 |
| hypothetical protein | A33Q_2652 | Not Available | Positive | 2732669 - 2735860 | 121672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
