Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mg/co/ni transporter mgte | A33Q_2633 | Not Available | Negative | 2706983 - 2708359 | 51082.4 |
| mg(2+) transport atpase protein c | A33Q_2634 | Not Available | Negative | 2708361 - 2709077 | 25648.1 |
| hypothetical protein | A33Q_2635 | Not Available | Negative | 2709064 - 2709207 | 5570.92 |
| two-component system sensor histidine kinase | A33Q_2636 | Not Available | Negative | 2709268 - 2710605 | 50646.9 |
| two-component system response regulator | A33Q_2637 | Not Available | Negative | 2710629 - 2711321 | 26227.9 |
| hypothetical protein of cupin superfamily | A33Q_2638 | Not Available | Negative | 2711326 - 2711802 | 18290.7 |
| udp-n-acetylglucosamine 2-epimerase | A33Q_2639 | Not Available | Negative | 2711803 - 2712897 | 40424.9 |
| hypothetical protein | A33Q_2640 | Not Available | Positive | 2713074 - 2713739 | 25111.6 |
| hypothetical protein | A33Q_2641 | Not Available | Positive | 2713736 - 2715439 | 65733.9 |
| dna-binding response regulator, arac family | A33Q_2642 | Not Available | Positive | 2715980 - 2719285 | 125556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
