Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2613 | Not Available | Positive | 2685923 - 2686456 | 19920.0 |
| putative nitroreductase | A33Q_2614 | Not Available | Negative | 2686605 - 2687207 | 23123.8 |
| carboxypeptidase-related protein | A33Q_2615 | Not Available | Negative | 2687275 - 2688756 | 55364.4 |
| aldo/keto reductase family | A33Q_2616 | Not Available | Negative | 2688840 - 2690288 | 53018.5 |
| amino acid transporter | A33Q_2617 | Not Available | Negative | 2690293 - 2691765 | 53447.8 |
| hypothetical protein | A33Q_2618 | Not Available | Negative | 2692020 - 2692136 | 4717.54 |
| superfamily ii dna/rna helicase, snf2 family | A33Q_2619 | Not Available | Positive | 2692167 - 2695013 | 109858.0 |
| formyltetrahydrofolate deformylase | A33Q_2620 | Not Available | Positive | 2695142 - 2695942 | 30832.4 |
| hypothetical protein | A33Q_2621 | Not Available | Negative | 2696191 - 2696352 | 6303.68 |
| tonb-dependent receptor | A33Q_2622 | Not Available | Positive | 2696413 - 2698593 | 82294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
