Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf336 | A33Q_2593 | Not Available | Positive | 2661377 - 2661841 | 16310.7 |
| proline iminopeptidase | A33Q_2594 | Not Available | Positive | 2661854 - 2662807 | 35681.4 |
| putative sterol desaturase-related protein | A33Q_2595 | Not Available | Positive | 2662942 - 2663853 | 36170.6 |
| prokaryotic atpase | A33Q_2596 | Not Available | Negative | 2663983 - 2665116 | 43405.6 |
| carboxylesterase, type b | A33Q_2597 | Not Available | Negative | 2665256 - 2666863 | 59484.2 |
| putative nudix-like regulator | A33Q_2598 | Not Available | Positive | 2667261 - 2667962 | 27125.8 |
| sarcosine oxidase | A33Q_2599 | Not Available | Negative | 2668001 - 2669155 | 42505.6 |
| hypothetical protein | A33Q_2600 | Not Available | Negative | 2669727 - 2670320 | 21946.3 |
| glucose-methanol-choline (gmc) oxidoreductase:nad binding site | A33Q_2601 | Not Available | Negative | 2670332 - 2672038 | 64170.7 |
| hypothetical protein | A33Q_2602 | Not Available | Positive | 2672092 - 2672211 | 4954.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
