Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2583 | Not Available | Positive | 2650147 - 2650269 | 4635.82 |
| diaminopimelate epimerase | A33Q_2584 | Not Available | Positive | 2650221 - 2651006 | 28686.8 |
| protein export cytoplasm protein seca atpase rna helicase | A33Q_2585 | Not Available | Positive | 2651171 - 2654548 | 127161.0 |
| hypothetical protein | A33Q_2586 | Not Available | Positive | 2654572 - 2655138 | 21681.5 |
| n-acetyl-l,l-diaminopimelate deacetylase | A33Q_2587 | Not Available | Positive | 2655098 - 2656285 | 43101.3 |
| endonuclease | A33Q_2588 | Not Available | Positive | 2656526 - 2657308 | 29859.5 |
| hypothetical protein | A33Q_2589 | Not Available | Negative | 2657293 - 2657418 | 4820.82 |
| atp-dependent dna helicase recg | A33Q_2590 | Not Available | Positive | 2657488 - 2659581 | 79727.5 |
| hypothetical protein | A33Q_2591 | Not Available | Negative | 2659624 - 2660001 | 14288.5 |
| glucose-fructose oxidoreductase | A33Q_2592 | Not Available | Negative | 2660159 - 2661262 | 40767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
