Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0244 | Not Available | Negative | 247077 - 248048 | 37042.1 |
| putative lipoprotein | A33Q_0245 | Not Available | Positive | 248130 - 248624 | 18270.1 |
| hypothetical protein | A33Q_0246 | Not Available | Negative | 248675 - 248794 | 4671.96 |
| atp synthase beta chain | A33Q_0247 | Not Available | Positive | 248828 - 250330 | 54282.1 |
| atp synthase epsilon chain | A33Q_0248 | Not Available | Positive | 250371 - 250619 | 8651.39 |
| ssu ribosomal protein s21p | A33Q_0249 | Not Available | Positive | 250746 - 250940 | 7542.3 |
| integrase, site-specific recombinase | A33Q_0250 | Not Available | Positive | 251251 - 252135 | 34062.1 |
| ribosome hibernation protein yhbh | A33Q_0251 | Not Available | Positive | 252164 - 252469 | 11795.3 |
| cyanate transport system protein | A33Q_0252 | Not Available | Negative | 252551 - 253729 | 42297.4 |
| ferrochelatase, protoheme ferro-lyase | A33Q_0253 | Not Available | Negative | 253772 - 254806 | 39404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
