Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein secretion chaperonin csaa | A33Q_2575 | Not Available | Negative | 2642088 - 2642423 | 12519.1 |
| hypothetical protein | A33Q_2576 | Not Available | Positive | 2642554 - 2642880 | 12865.9 |
| trna/rrna methyltransferase | A33Q_2577 | Not Available | Negative | 2642935 - 2643471 | 20037.2 |
| dna mismatch repair protein muts | A33Q_2578 | Not Available | Positive | 2643558 - 2646170 | 98834.1 |
| transcriptional regulator, luxr family protein | A33Q_2579 | Not Available | Positive | 2646215 - 2647027 | 31419.1 |
| Trna-gly | Not Available | Not Available | Positive | 2647175 - 2647250 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2647316 - 2647399 | Not Available |
| putative secreted protein | A33Q_2580 | Not Available | Negative | 2647561 - 2648028 | 17617.8 |
| hypothetical protein | A33Q_2581 | Not Available | Negative | 2648117 - 2648875 | 26919.2 |
| manganese superoxide dismutase | A33Q_2582 | Not Available | Negative | 2649254 - 2650030 | 28426.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
