Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene dehydrogenase | A33Q_2565 | Not Available | Negative | 2635616 - 2637097 | 55913.3 |
| rna polymerase ecf-type sigma factor | A33Q_2566 | Not Available | Negative | 2637103 - 2637579 | 18412.2 |
| transcriptional regulator, merr family | A33Q_2567 | Not Available | Negative | 2637831 - 2638727 | 34684.1 |
| beta-carotene hydroxylase | A33Q_2568 | Not Available | Negative | 2638724 - 2639170 | 17456.0 |
| hypothetical protein | A33Q_2569 | Not Available | Negative | 2639217 - 2639882 | 25268.6 |
| hypothetical protein | A33Q_2570 | Not Available | Positive | 2640007 - 2640312 | 12140.6 |
| dna-3-methyladenine glycosylase | A33Q_2571 | Not Available | Positive | 2640325 - 2640918 | 22822.3 |
| hypothetical protein | A33Q_2572 | Not Available | Negative | 2640974 - 2641711 | 27628.3 |
| hypothetical protein | A33Q_2573 | Not Available | Negative | 2641786 - 2641920 | 5359.65 |
| biphenyl dioxygenase | A33Q_2574 | Not Available | Positive | 2641924 - 2642091 | 6173.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
