Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | A33Q_2555 | Not Available | Negative | 2627006 - 2627584 | 22161.0 |
| methyltransferase | A33Q_2556 | Not Available | Negative | 2627705 - 2628526 | 31412.9 |
| hypothetical protein | A33Q_2557 | Not Available | Negative | 2628589 - 2628726 | 5200.21 |
| hypothetical protein | A33Q_2558 | Not Available | Positive | 2628795 - 2629259 | 17688.2 |
| outer membrane protein, omp85 family | A33Q_2559 | Not Available | Negative | 2629349 - 2630476 | 43191.1 |
| tonb-dependent receptor | A33Q_2560 | Not Available | Negative | 2630524 - 2632929 | 90781.3 |
| beta-carotene ketolase | A33Q_2561 | Not Available | Negative | 2633020 - 2633724 | 28087.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | A33Q_2562 | Not Available | Negative | 2633752 - 2634597 | 32157.2 |
| hypothetical protein | A33Q_2563 | Not Available | Negative | 2634594 - 2634743 | 5976.41 |
| phytoene synthase | A33Q_2564 | Not Available | Negative | 2634752 - 2635594 | 32480.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
