Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | A33Q_2545 | Not Available | Positive | 2617045 - 2617800 | 28630.8 |
| two-component response regulator | A33Q_2546 | Not Available | Positive | 2617852 - 2618478 | 23982.3 |
| cysteine desulfurase | A33Q_2547 | Not Available | Negative | 2618553 - 2619695 | 41748.7 |
| phosphomannomutase | A33Q_2548 | Not Available | Negative | 2619747 - 2621135 | 50338.4 |
| hypothetical protein | A33Q_2549 | Not Available | Negative | 2621197 - 2621427 | 8262.05 |
| nucleoside triphosphate pyrophosphohydrolase mazg | A33Q_2550 | Not Available | Positive | 2621559 - 2622317 | 29363.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | A33Q_2551 | Not Available | Negative | 2622397 - 2622894 | 19162.8 |
| single-stranded-dna-specific exonuclease recj | A33Q_2552 | Not Available | Positive | 2623030 - 2624748 | 65092.8 |
| lipopolysaccharide abc transporter, atp-binding protein lptb | A33Q_2553 | Not Available | Positive | 2624751 - 2625488 | 27566.8 |
| putative auxin-regulated protein | A33Q_2554 | Not Available | Positive | 2625488 - 2627005 | 57917.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
