Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 5-triphosphatase rdgb (dhaptp, ditp, xtp-specific) | A33Q_2535 | Not Available | Positive | 2608798 - 2609415 | 23113.8 |
| uridine kinase | A33Q_2536 | Not Available | Positive | 2609425 - 2610066 | 24924.0 |
| hypothetical protein | A33Q_2537 | Not Available | Positive | 2610211 - 2610504 | 11050.3 |
| protein-export membrane protein secd | A33Q_2538 | Not Available | Positive | 2610582 - 2613560 | 107886.0 |
| hypothetical protein | A33Q_2539 | Not Available | Positive | 2613748 - 2614548 | 30898.0 |
| hypothetical protein | A33Q_2540 | Not Available | Positive | 2614577 - 2614996 | 15811.6 |
| hypothetical protein | A33Q_2541 | Not Available | Positive | 2615005 - 2615679 | 26208.1 |
| hypothetical protein | A33Q_2542 | Not Available | Negative | 2615784 - 2616197 | 15352.7 |
| hypothetical protein | A33Q_2543 | Not Available | Positive | 2616459 - 2616638 | 6913.78 |
| hypothetical protein | A33Q_2544 | Not Available | Positive | 2616741 - 2616881 | 5189.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
