Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamyl-2,6- diaminopimelate--d-alanyl-d-alanine ligase | A33Q_2505 | Not Available | Negative | 2579232 - 2581697 | 92058.9 |
| hypothetical protein | A33Q_2506 | Not Available | Negative | 2581718 - 2582779 | 40544.8 |
| segregation and condensation protein a | A33Q_2507 | Not Available | Negative | 2582783 - 2583532 | 29420.7 |
| 1-deoxy-d-xylulose 5-phosphate synthase | A33Q_2508 | Not Available | Positive | 2583720 - 2585639 | 70687.1 |
| hypothetical protein | A33Q_2509 | Not Available | Positive | 2585663 - 2585896 | 8915.76 |
| alpha/beta hydrolase fold protein | A33Q_2510 | Not Available | Positive | 2586176 - 2586862 | 25578.0 |
| permease | A33Q_2511 | Not Available | Negative | 2586870 - 2587706 | 31719.4 |
| hypothetical protein | A33Q_2512 | Not Available | Positive | 2587750 - 2587941 | 7019.65 |
| hypothetical protein | A33Q_2513 | Not Available | Positive | 2588023 - 2588166 | 5637.85 |
| two-component system response regulator | A33Q_2514 | Not Available | Negative | 2588452 - 2589141 | 26544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
