Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, group 2 family protein | A33Q_2495 | Not Available | Negative | 2564380 - 2565417 | 40510.1 |
| hypothetical protein | A33Q_2496 | Not Available | Negative | 2565404 - 2566672 | 49125.7 |
| membrane protein involved in the export of o-antigen, teichoic acid lipoteichoic acid | A33Q_2497 | Not Available | Negative | 2566660 - 2568066 | 53487.1 |
| exopolysaccharide gene cluster protein | A33Q_2498 | Not Available | Negative | 2568068 - 2568970 | 35164.2 |
| hypothetical protein | A33Q_2499 | Not Available | Negative | 2569454 - 2570302 | 31468.6 |
| hypothetical protein | A33Q_2500 | Not Available | Negative | 2570401 - 2570526 | 4623.63 |
| hypothetical protein | A33Q_2501 | Not Available | Positive | 2571212 - 2572375 | 44071.5 |
| chitodextrinase precursor | A33Q_2502 | Not Available | Negative | 2572439 - 2575036 | 94746.4 |
| prolyl endopeptidase | A33Q_2503 | Not Available | Negative | 2575703 - 2577829 | 78970.0 |
| seryl-trna synthetase | A33Q_2504 | Not Available | Negative | 2577887 - 2579158 | 47997.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
