Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | A33Q_2465 | Not Available | Positive | 2536751 - 2537722 | 36535.0 |
| hypothetical protein | A33Q_2466 | Not Available | Positive | 2537757 - 2537879 | 4911.1 |
| hypothetical protein | A33Q_2467 | Not Available | Negative | 2537839 - 2538261 | 16081.0 |
| polysaccharide deacetylase | A33Q_2468 | Not Available | Negative | 2538324 - 2539637 | 50285.2 |
| hypothetical protein | A33Q_2469 | Not Available | Positive | 2539721 - 2540155 | 17015.9 |
| steroid delta-isomerase domain protein | A33Q_2470 | Not Available | Positive | 2540163 - 2540558 | 15118.3 |
| hypothetical protein | A33Q_2471 | Not Available | Positive | 2540563 - 2540682 | 4822.11 |
| hypothetical protein | A33Q_2472 | Not Available | Positive | 2540765 - 2541316 | 20265.2 |
| hypothetical protein | A33Q_2473 | Not Available | Positive | 2541395 - 2541847 | 17329.1 |
| gtpase and trna-u34 5-formylation enzyme trme | A33Q_2474 | Not Available | Positive | 2541849 - 2543231 | 50925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
