Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s-cluster oxidoreductase | A33Q_2423 | Not Available | Negative | 2490097 - 2490708 | 22910.2 |
| hypothetical protein | A33Q_2424 | Not Available | Positive | 2490905 - 2491639 | 27760.4 |
| membrane-bound lytic murein transglycosylase d precursor | A33Q_2425 | Not Available | Positive | 2491642 - 2492592 | 36779.8 |
| hypothetical protein | A33Q_2426 | Not Available | Positive | 2492736 - 2494544 | 69520.0 |
| excinuclease abc subunit a | A33Q_2427 | Not Available | Positive | 2494657 - 2497488 | 105656.0 |
| putative transmembrane sensor histidine kinase transcription regulator protein | A33Q_2428 | Not Available | Positive | 2497639 - 2498634 | 38012.5 |
| two-component system, regulatory protein | A33Q_2429 | Not Available | Positive | 2498648 - 2499385 | 28397.9 |
| transcriptional regulator | A33Q_2430 | Not Available | Positive | 2499534 - 2500292 | 28621.7 |
| hypothetical protein | A33Q_2431 | Not Available | Negative | 2500362 - 2500712 | 12790.7 |
| glutamine amidotransferase chain of nad synthetase | A33Q_2432 | Not Available | Negative | 2501084 - 2501584 | 18749.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
