Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0224 | Not Available | Positive | 226018 - 226698 | 25119.2 |
| hypothetical protein | A33Q_0225 | Not Available | Positive | 226829 - 228124 | 50344.6 |
| acetyltransferase | A33Q_0226 | Not Available | Positive | 228181 - 228819 | 22166.8 |
| rhodanese domain protein upf0176, firmicutes subgroup | A33Q_0227 | Not Available | Positive | 228878 - 229861 | 37649.5 |
| purine nucleoside phosphorylase | A33Q_0228 | Not Available | Positive | 229854 - 230720 | 31956.6 |
| hypothetical protein | A33Q_0229 | Not Available | Negative | 230743 - 231024 | 10785.1 |
| transcriptional regulator | A33Q_0230 | Not Available | Negative | 231121 - 231747 | 23359.6 |
| sensor histidine kinase | A33Q_0231 | Not Available | Negative | 231750 - 233783 | 77801.7 |
| tonb-dependent receptor | A33Q_0232 | Not Available | Positive | 234175 - 236604 | 92059.9 |
| atpase components of abc transporters with duplicated atpase domain protein | A33Q_0233 | Not Available | Negative | 236685 - 238574 | 72134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
