Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epoxyqueuosine (oq) reductase queg | A33Q_2353 | Not Available | Negative | 2413543 - 2414472 | 35273.4 |
| holliday junction dna helicase ruvb | A33Q_2354 | Not Available | Negative | 2414849 - 2415880 | 38071.8 |
| hypothetical protein | A33Q_2355 | Not Available | Positive | 2415889 - 2416008 | 4713.02 |
| thiamin biosynthesis lipoprotein apbe | A33Q_2356 | Not Available | Positive | 2416031 - 2417089 | 39055.4 |
| zinc transporter, zip family | A33Q_2357 | Not Available | Positive | 2417100 - 2417879 | 28843.9 |
| hypothetical protein | A33Q_2358 | Not Available | Positive | 2418014 - 2418436 | 16517.4 |
| hypothetical protein | A33Q_2359 | Not Available | Positive | 2418578 - 2420023 | 53403.9 |
| sodium:solute symporter associated protein | A33Q_2360 | Not Available | Positive | 2420044 - 2420307 | 10252.6 |
| acetate permease actp (cation/acetate symporter) | A33Q_2361 | Not Available | Positive | 2420321 - 2422006 | 60160.9 |
| hypothetical protein | A33Q_2362 | Not Available | Positive | 2422113 - 2422322 | 8187.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
