Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | A33Q_2334 | Not Available | Positive | 2390815 - 2391375 | 22151.2 |
| hypothetical protein | A33Q_2335 | Not Available | Positive | 2391420 - 2391611 | 7512.13 |
| outer membrane efflux protein | A33Q_2336 | Not Available | Positive | 2391777 - 2393126 | 50409.1 |
| cobalt-zinc-cadmium resistance protein czca | A33Q_2337 | Not Available | Positive | 2393170 - 2396277 | 113099.0 |
| efflux transporter, rnd family, mfp subunit | A33Q_2338 | Not Available | Positive | 2396282 - 2397391 | 40049.6 |
| hypothetical protein | A33Q_2339 | Not Available | Positive | 2397562 - 2397930 | 13745.8 |
| protein of unknown function duf81 | A33Q_2340 | Not Available | Positive | 2398102 - 2398875 | 27833.1 |
| camp-binding protein | A33Q_2341 | Not Available | Positive | 2398900 - 2399475 | 22109.3 |
| major facilitator superfamily (mfs) transporter | A33Q_2342 | Not Available | Positive | 2399555 - 2400775 | 44247.9 |
| hypothetical protein | A33Q_2343 | Not Available | Negative | 2400838 - 2401608 | 29446.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
