Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2314 | Not Available | Negative | 2373263 - 2373397 | 5234.54 |
| hypothetical protein | A33Q_2315 | Not Available | Positive | 2373348 - 2373506 | 6350.89 |
| hypothetical protein | A33Q_2316 | Not Available | Negative | 2373547 - 2373927 | 14624.3 |
| hypothetical protein | A33Q_2317 | Not Available | Positive | 2374169 - 2374765 | 23067.6 |
| lysine decarboxylase family | A33Q_2318 | Not Available | Positive | 2374812 - 2375384 | 21295.1 |
| gaf domain-containing protein, involved in signal transduction | A33Q_2319 | Not Available | Negative | 2375406 - 2375888 | 17595.9 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | A33Q_2320 | Not Available | Negative | 2375890 - 2376924 | 39012.6 |
| putative lipoprotein | A33Q_2321 | Not Available | Negative | 2376927 - 2377637 | 25752.7 |
| hypothetical protein | A33Q_2322 | Not Available | Negative | 2377823 - 2378635 | 29582.2 |
| deoxyguanosinetriphosphate triphosphohydrolase | A33Q_2323 | Not Available | Positive | 2378719 - 2380107 | 52067.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
