Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl peptidase iv | A33Q_2294 | Not Available | Negative | 2353088 - 2355268 | 82419.0 |
| d-alanine--d-alanine ligase | A33Q_2295 | Not Available | Positive | 2355439 - 2356425 | 36803.1 |
| hypothetical protein | A33Q_2296 | Not Available | Negative | 2356506 - 2356979 | 17724.3 |
| hypothetical protein | A33Q_2297 | Not Available | Negative | 2357051 - 2357170 | 4581.6 |
| s-adenosylmethionine synthetase | A33Q_2298 | Not Available | Negative | 2357160 - 2358413 | 46130.7 |
| myo-inositol 2-dehydrogenase | A33Q_2299 | Not Available | Negative | 2358554 - 2359636 | 41006.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | A33Q_2300 | Not Available | Negative | 2359605 - 2360117 | 19202.7 |
| hypothetical protein | A33Q_2301 | Not Available | Positive | 2360161 - 2360289 | 4886.97 |
| hypothetical protein | A33Q_2302 | Not Available | Positive | 2360858 - 2361013 | 5967.27 |
| excinuclease abc subunit a protein | A33Q_2303 | Not Available | Positive | 2361245 - 2364061 | 104922.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
