Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2284 | Not Available | Positive | 2341531 - 2345877 | 166534.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | A33Q_2285 | Not Available | Negative | 2345884 - 2346783 | 32245.9 |
| trna dihydrouridine synthase b | A33Q_2286 | Not Available | Negative | 2346917 - 2347855 | 35440.5 |
| caax amino terminal protease family | A33Q_2287 | Not Available | Positive | 2347947 - 2348906 | 35929.1 |
| hypothetical protein | A33Q_2288 | Not Available | Positive | 2348920 - 2349087 | 6243.71 |
| phosphatidate cytidylyltransferase | A33Q_2289 | Not Available | Positive | 2349089 - 2349928 | 31214.4 |
| nad-specific glutamate dehydrogenase | A33Q_2290 | Not Available | Positive | 2350002 - 2351279 | 46220.9 |
| phosphatidylserine decarboxylase | A33Q_2291 | Not Available | Positive | 2351356 - 2352021 | 25206.0 |
| hypothetical protein | A33Q_2292 | Not Available | Negative | 2352066 - 2352470 | 16176.5 |
| hypothetical protein | A33Q_2293 | Not Available | Negative | 2352598 - 2352972 | 14176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
