Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2274 | Not Available | Negative | 2330354 - 2331181 | 33284.6 |
| hypothetical protein | A33Q_2275 | Not Available | Negative | 2331434 - 2333539 | 78088.3 |
| hypothetical protein | A33Q_2276 | Not Available | Positive | 2333803 - 2334993 | 46945.8 |
| excinuclease abc subunit b | A33Q_2277 | Not Available | Positive | 2335056 - 2337092 | 77195.4 |
| hypothetical protein | A33Q_2278 | Not Available | Positive | 2337188 - 2337427 | 9222.8 |
| hypothetical protein | A33Q_2279 | Not Available | Positive | 2337420 - 2337707 | 11076.2 |
| putative atp-dependent dna helicase | A33Q_2280 | Not Available | Positive | 2337978 - 2338616 | 24106.7 |
| 1-aminocyclopropane-1-carboxylate deaminase | A33Q_2281 | Not Available | Negative | 2338611 - 2339567 | 36039.8 |
| ribosomal large subunit pseudouridine synthase d | A33Q_2282 | Not Available | Positive | 2339587 - 2340624 | 39518.1 |
| hypothetical protein | A33Q_2283 | Not Available | Negative | 2341088 - 2341210 | 4663.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
