Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2235 | Not Available | Negative | 2295676 - 2296302 | 23592.8 |
| tonb-dependent receptor | A33Q_2236 | Not Available | Negative | 2296399 - 2299173 | 104317.0 |
| hypothetical protein | A33Q_2237 | Not Available | Negative | 2299245 - 2299358 | 4496.57 |
| hypothetical protein | A33Q_2238 | Not Available | Negative | 2299324 - 2299533 | 8054.58 |
| glutamyl-trna synthetase | A33Q_2239 | Not Available | Negative | 2299545 - 2301086 | 58094.4 |
| hypothetical protein | A33Q_2240 | Not Available | Negative | 2301149 - 2301322 | 6382.2 |
| lsu ribosomal protein l19p | A33Q_2241 | Not Available | Negative | 2301327 - 2301692 | 13995.1 |
| trna (guanine37-n1) -methyltransferase | A33Q_2242 | Not Available | Negative | 2301774 - 2302460 | 25441.7 |
| 16s rrna processing protein rimm | A33Q_2243 | Not Available | Negative | 2302460 - 2302990 | 20225.1 |
| ssu ribosomal protein s16p | A33Q_2244 | Not Available | Negative | 2303005 - 2303574 | 20562.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
