Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | A33Q_2223 | Not Available | Positive | 2286815 - 2287672 | 32580.4 |
| 5-formyltetrahydrofolate cyclo-ligase | A33Q_2226 | Not Available | Negative | 2288347 - 2288913 | 21197.8 |
| hypothetical protein | A33Q_2227 | Not Available | Negative | 2288906 - 2290477 | 60837.4 |
| lead, cadmium, zinc and mercury transporting atpase | A33Q_2228 | Not Available | Positive | 2290637 - 2290945 | 10934.7 |
| hypothetical protein | A33Q_2229 | Not Available | Positive | 2290953 - 2291240 | 10743.1 |
| putative zinc protease | A33Q_2230 | Not Available | Positive | 2291296 - 2292537 | 46848.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | A33Q_2231 | Not Available | Positive | 2292710 - 2293192 | 17698.5 |
| hypothetical protein | A33Q_2232 | Not Available | Positive | 2293194 - 2293877 | 26209.2 |
| hypothetical protein | A33Q_2233 | Not Available | Negative | 2293946 - 2295016 | 41410.6 |
| nifu domain protein | A33Q_2234 | Not Available | Negative | 2295021 - 2295605 | 21482.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
