Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur protein | A33Q_2213 | Not Available | Negative | 2274830 - 2275579 | 27169.5 |
| succinate dehydrogenase flavoprotein subunit | A33Q_2214 | Not Available | Negative | 2275607 - 2277541 | 71755.2 |
| succinate dehydrogenase cytochrome b subunit | A33Q_2215 | Not Available | Negative | 2277581 - 2278213 | 23157.8 |
| hypothetical protein | A33Q_2216 | Not Available | Positive | 2278530 - 2281322 | 105174.0 |
| hypothetical protein | A33Q_2217 | Not Available | Positive | 2281319 - 2281735 | 16476.9 |
| carbonic anhydrase | A33Q_2218 | Not Available | Positive | 2281777 - 2282406 | 23854.8 |
| malonyl coa-acyl carrier protein transacylase | A33Q_2219 | Not Available | Positive | 2282586 - 2283464 | 31557.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | A33Q_2220 | Not Available | Negative | 2283461 - 2283979 | 19588.7 |
| protease iv | A33Q_2221 | Not Available | Positive | 2284051 - 2285811 | 65165.0 |
| nitrilotriacetate monooxygenase component b | A33Q_2222 | Not Available | Negative | 2285823 - 2286722 | 33417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
