Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine type site-specific recombinase | A33Q_2194 | Not Available | Negative | 2257176 - 2258393 | 47388.9 |
| Trna-ser | Not Available | Not Available | Positive | 2258756 - 2258846 | Not Available |
| l-asparaginase | A33Q_2195 | Not Available | Negative | 2258920 - 2260005 | 39746.3 |
| putative deoxyribonuclease ycfh | A33Q_2196 | Not Available | Negative | 2260002 - 2260799 | 30604.7 |
| tonb-dependent receptor | A33Q_2197 | Not Available | Negative | 2260775 - 2261878 | 41779.4 |
| polysaccharide deacetylase | A33Q_2198 | Not Available | Negative | 2261875 - 2262453 | 22001.7 |
| serine phosphatase rsbu, regulator of sigma subunit | A33Q_2199 | Not Available | Negative | 2262507 - 2263730 | 46806.6 |
| hypothetical protein | A33Q_2200 | Not Available | Negative | 2263720 - 2263971 | 9844.71 |
| n-acetylglucosaminyltransferase | A33Q_2201 | Not Available | Negative | 2264002 - 2265120 | 41806.0 |
| crossover junction endodeoxyribonuclease ruvc | A33Q_2202 | Not Available | Positive | 2265142 - 2265717 | 21051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
