Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccme, heme chaperone | A33Q_0204 | Not Available | Negative | 208829 - 209245 | 15090.3 |
| hypothetical protein | A33Q_0205 | Not Available | Negative | 209303 - 209551 | 9346.59 |
| cytochrome c-type biogenesis protein ccmc, putative heme lyase for ccme | A33Q_0206 | Not Available | Negative | 209570 - 210118 | 20593.5 |
| abc transporter involved in cytochrome c biogenesis, ccmb subunit | A33Q_0207 | Not Available | Negative | 210383 - 211048 | 24472.7 |
| hypothetical protein | A33Q_0208 | Not Available | Positive | 211361 - 211483 | 4476.25 |
| hypothetical protein | A33Q_0209 | Not Available | Positive | 211584 - 211943 | 13898.0 |
| chaperone protein htpg | A33Q_0210 | Not Available | Positive | 212393 - 214276 | 71598.3 |
| hypothetical protein | A33Q_0211 | Not Available | Positive | 214677 - 214889 | 7095.75 |
| hypothetical protein | A33Q_0212 | Not Available | Positive | 214934 - 216091 | 44889.4 |
| hypothetical protein | A33Q_0213 | Not Available | Positive | 216124 - 216477 | 13513.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
