Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme a synthase, cytochrome oxidase biogenesis protein cox15-ctaa | A33Q_2154 | Not Available | Negative | 2216935 - 2217963 | 38902.9 |
| queuosine biosynthesis qued, ptps-i | A33Q_2155 | Not Available | Negative | 2217944 - 2218351 | 15869.3 |
| nitrate/nitrite transporter | A33Q_2156 | Not Available | Positive | 2218511 - 2219851 | 48555.9 |
| nitrate/nitrite transporter | A33Q_2157 | Not Available | Positive | 2220024 - 2221079 | 39838.1 |
| assimilatory nitrate reductase large subunit | A33Q_2158 | Not Available | Positive | 2221104 - 2223335 | 82909.8 |
| formate dehydrogenase o beta subunit | A33Q_2159 | Not Available | Positive | 2223348 - 2223920 | 21147.6 |
| twin-arginine translocation pathway signal | A33Q_2160 | Not Available | Positive | 2223933 - 2224445 | 19177.2 |
| hypothetical protein | A33Q_2161 | Not Available | Positive | 2224451 - 2224705 | 9556.82 |
| molybdenum cofactor biosynthesis protein moaa | A33Q_2162 | Not Available | Positive | 2224821 - 2225693 | 32969.6 |
| molybdopterin biosynthesis protein moea | A33Q_2163 | Not Available | Positive | 2226152 - 2227327 | 42214.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
