Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-containing nitrite reductase | A33Q_2144 | Not Available | Positive | 2210197 - 2211675 | 53594.0 |
| putative signal peptide protein | A33Q_2145 | Not Available | Positive | 2211693 - 2212460 | 28684.9 |
| sco1/senc family protein | A33Q_2146 | Not Available | Positive | 2212468 - 2213058 | 22656.4 |
| hypothetical protein | A33Q_2147 | Not Available | Negative | 2213209 - 2213568 | 14424.9 |
| membrane protein, hpp family | A33Q_2148 | Not Available | Positive | 2213716 - 2214369 | 24514.2 |
| hypothetical protein | A33Q_2149 | Not Available | Positive | 2214374 - 2214688 | 11858.0 |
| hypothetical protein | A33Q_2150 | Not Available | Negative | 2214855 - 2215004 | 5567.87 |
| hypothetical protein | A33Q_2151 | Not Available | Negative | 2215111 - 2215620 | 17740.6 |
| hypothetical protein | A33Q_2152 | Not Available | Positive | 2216003 - 2216182 | 6534.82 |
| hypothetical protein | A33Q_2153 | Not Available | Positive | 2216468 - 2216923 | 17324.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
