Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | A33Q_2124 | Not Available | Negative | 2189990 - 2190823 | 29736.5 |
| transcriptional regulator, badm/rrf2 family | A33Q_2125 | Not Available | Negative | 2191284 - 2191724 | 16233.7 |
| hypothetical protein | A33Q_2126 | Not Available | Negative | 2191742 - 2192839 | 40600.3 |
| hypothetical protein | A33Q_2127 | Not Available | Negative | 2193227 - 2195086 | 70204.5 |
| hypothetical protein | A33Q_2128 | Not Available | Negative | 2195131 - 2195730 | 22883.7 |
| ribonucleotide reductase of class iii (anaerobic), large subunit | A33Q_2129 | Not Available | Positive | 2195993 - 2198095 | 81032.0 |
| hypothetical protein | A33Q_2130 | Not Available | Positive | 2198099 - 2198296 | 7917.39 |
| ribonucleotide reductase of class iii (anaerobic), activating protein | A33Q_2131 | Not Available | Positive | 2198328 - 2198966 | 24372.4 |
| hypothetical protein | A33Q_2132 | Not Available | Negative | 2199017 - 2199466 | 16827.2 |
| nitric-oxide reductase, quinol-dependent | A33Q_2133 | Not Available | Negative | 2199487 - 2201835 | 89768.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
