Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2114 | Not Available | Negative | 2180520 - 2180951 | 15875.2 |
| hypothetical protein | A33Q_2115 | Not Available | Positive | 2180977 - 2181099 | 4291.3 |
| rna polymerase sigma-54 factor rpon | A33Q_2116 | Not Available | Negative | 2181138 - 2182517 | 52882.1 |
| asparaginyl-trna synthetase | A33Q_2117 | Not Available | Positive | 2182692 - 2184239 | 59149.5 |
| sugar transport protein | A33Q_2118 | Not Available | Negative | 2184289 - 2185536 | 45518.2 |
| nad(p)hx epimerase | A33Q_2119 | Not Available | Negative | 2185639 - 2187111 | 53721.9 |
| membrane protein | A33Q_2120 | Not Available | Negative | 2187104 - 2188426 | 49377.6 |
| biopolymer transport protein exbd/tolr | A33Q_2121 | Not Available | Negative | 2188498 - 2188959 | 17495.3 |
| biopolymer transport protein exbd/tolr | A33Q_2122 | Not Available | Negative | 2188961 - 2189602 | 23535.0 |
| hypothetical protein | A33Q_2123 | Not Available | Negative | 2189602 - 2189931 | 11550.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
