Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2104 | Not Available | Positive | 2171551 - 2171952 | 14952.2 |
| hypothetical protein | A33Q_2105 | Not Available | Positive | 2172027 - 2172776 | 29071.6 |
| hypothetical protein | A33Q_2106 | Not Available | Positive | 2172874 - 2172987 | 4476.48 |
| atpase | A33Q_2107 | Not Available | Positive | 2173202 - 2174341 | 43574.5 |
| hypothetical protein | A33Q_2108 | Not Available | Negative | 2174346 - 2174837 | 18368.9 |
| 3'-to-5' exoribonuclease rnase r | A33Q_2109 | Not Available | Positive | 2174994 - 2177186 | 83959.1 |
| dimethylallyltransferase | A33Q_2110 | Not Available | Positive | 2177161 - 2178147 | 37195.0 |
| rhomboid family protein | A33Q_2111 | Not Available | Positive | 2178158 - 2178787 | 23765.5 |
| hypothetical protein | A33Q_2112 | Not Available | Negative | 2178820 - 2179128 | 11344.5 |
| hypothetical protein | A33Q_2113 | Not Available | Positive | 2179255 - 2180424 | 44277.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
