Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l21p | A33Q_0194 | Not Available | Negative | 195538 - 195849 | 11386.0 |
| hypothetical protein | A33Q_0195 | Not Available | Positive | 196337 - 196456 | 4141.25 |
| ribonucleotide reductase of class ia (aerobic), beta subunit | A33Q_0196 | Not Available | Positive | 196487 - 197467 | 37686.7 |
| ribonucleotide reductase of class ia (aerobic), alpha subunit | A33Q_0197 | Not Available | Positive | 197501 - 199903 | 90458.0 |
| microsomal dipeptidase | A33Q_0198 | Not Available | Negative | 200067 - 201305 | 45981.2 |
| hypothetical protein | A33Q_0199 | Not Available | Positive | 201498 - 203222 | 66699.8 |
| putative acyl-acp desaturase, stearoyl-acp desaturase | A33Q_0200 | Not Available | Positive | 203354 - 204355 | 37794.0 |
| putative pirin-related protein | A33Q_0201 | Not Available | Positive | 204502 - 205353 | 31968.4 |
| hypothetical protein | A33Q_0202 | Not Available | Negative | 205408 - 206184 | 28786.4 |
| cytochrome c heme lyase subunit ccmf | A33Q_0203 | Not Available | Negative | 206275 - 208803 | 94844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
