Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omega amidase | A33Q_2075 | Not Available | Negative | 2141773 - 2143314 | 58956.1 |
| potassium efflux system kefa protein | A33Q_2076 | Not Available | Positive | 2143474 - 2144376 | 34046.4 |
| hypothetical protein | A33Q_2077 | Not Available | Positive | 2144452 - 2145387 | 36728.5 |
| hypothetical protein | A33Q_2078 | Not Available | Positive | 2145500 - 2145883 | 14687.0 |
| hypothetical protein | A33Q_2079 | Not Available | Positive | 2145890 - 2146639 | 29287.0 |
| cytochrome c551/c552 | A33Q_2080 | Not Available | Negative | 2146719 - 2150174 | 128036.0 |
| beta-glucosidase | A33Q_2081 | Not Available | Positive | 2150372 - 2152705 | 86152.1 |
| hypothetical protein | A33Q_2082 | Not Available | Negative | 2152749 - 2153030 | 10977.5 |
| phosphoglycerate kinase | A33Q_2083 | Not Available | Negative | 2153275 - 2154474 | 42949.7 |
| yrdc/sua5 family protein, required for threonylcarbamoyladenosine (t(6)a) formation in trna | A33Q_2084 | Not Available | Negative | 2154561 - 2155523 | 34562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
