Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2065 | Not Available | Negative | 2134331 - 2134960 | 23504.1 |
| hypothetical protein | A33Q_2066 | Not Available | Negative | 2134957 - 2135358 | 15961.5 |
| hypothetical protein | A33Q_2067 | Not Available | Negative | 2135421 - 2135684 | 10432.5 |
| dehydrogenase with different specificities | A33Q_2068 | Not Available | Negative | 2135771 - 2136451 | 24126.8 |
| gtp cyclohydrolase i type 1 | A33Q_2069 | Not Available | Negative | 2136626 - 2137291 | 25399.2 |
| 6-pyruvoyl tetrahydrobiopterin synthase | A33Q_2070 | Not Available | Negative | 2137278 - 2137532 | 10052.0 |
| hypothetical protein | A33Q_2071 | Not Available | Positive | 2137922 - 2138653 | 27246.5 |
| l,d-transpeptidase ycbb | A33Q_2072 | Not Available | Negative | 2138655 - 2140331 | 64899.4 |
| 2-keto-3-deoxy-d-manno-octulosonate-8-phosphate synthase | A33Q_2073 | Not Available | Negative | 2140375 - 2141217 | 30652.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | A33Q_2074 | Not Available | Negative | 2141220 - 2141771 | 20935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
