Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation protein tata | A33Q_2045 | Not Available | Positive | 2108836 - 2109039 | 7413.31 |
| aspartyl-trna(asn) amidotransferase subunit a | A33Q_2046 | Not Available | Positive | 2109061 - 2110494 | 52884.8 |
| membrane-bound lytic murein transglycosylase d precursor | A33Q_2047 | Not Available | Positive | 2110507 - 2111925 | 53992.7 |
| hypothetical protein | A33Q_2048 | Not Available | Positive | 2111999 - 2113102 | 41869.7 |
| nadp-dependent malic enzyme | A33Q_2049 | Not Available | Positive | 2113126 - 2115393 | 82587.6 |
| holliday junction dna helicase ruva | A33Q_2050 | Not Available | Positive | 2115393 - 2115992 | 21996.9 |
| hypothetical protein | A33Q_2051 | Not Available | Positive | 2116015 - 2123187 | 271363.0 |
| glycine cleavage system h protein | A33Q_2052 | Not Available | Positive | 2123242 - 2123619 | 13901.2 |
| ferric siderophore transport system, periplasmic binding protein tonb | A33Q_2053 | Not Available | Positive | 2124076 - 2124750 | 25113.2 |
| hypothetical protein | A33Q_2054 | Not Available | Negative | 2124779 - 2124934 | 6008.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
