Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2035 | Not Available | Positive | 2095177 - 2097399 | 83780.9 |
| hypothetical protein | A33Q_2036 | Not Available | Positive | 2097404 - 2097976 | 22241.8 |
| gtp-binding protein typa/bipa | A33Q_2037 | Not Available | Positive | 2098177 - 2099922 | 65437.7 |
| isocitrate dehydrogenase | A33Q_2038 | Not Available | Negative | 2100226 - 2101680 | 53213.0 |
| enoyl-coa hydratase | A33Q_2039 | Not Available | Positive | 2101909 - 2102694 | 28075.8 |
| polysaccharide biosynthesis protein | A33Q_2040 | Not Available | Positive | 2102716 - 2104236 | 57323.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | A33Q_2041 | Not Available | Positive | 2104398 - 2104832 | 15840.1 |
| tetratricopeptide repeat (tpr) family protein | A33Q_2042 | Not Available | Positive | 2105066 - 2106748 | 64569.2 |
| hypothetical protein | A33Q_2043 | Not Available | Positive | 2106741 - 2107475 | 27952.7 |
| putative membrane protein | A33Q_2044 | Not Available | Positive | 2107500 - 2108723 | 45825.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
