Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator of the myo-inositol catabolic operon | A33Q_2005 | Not Available | Negative | 2065391 - 2066422 | 38387.1 |
| aminopeptidase y (arg, lys, leu preference) | A33Q_2006 | Not Available | Negative | 2066445 - 2067425 | 37089.4 |
| cysteinyl-trna synthetase | A33Q_2007 | Not Available | Negative | 2067415 - 2068908 | 56519.2 |
| catalase | A33Q_2008 | Not Available | Positive | 2069416 - 2071683 | 83345.5 |
| cystathionine gamma-synthase | A33Q_2009 | Not Available | Negative | 2071978 - 2073168 | 43181.9 |
| putative zinc-binding oxidoreductase | A33Q_2010 | Not Available | Negative | 2073221 - 2074225 | 36667.1 |
| retron-type rna-directed dna polymerase | A33Q_2011 | Not Available | Positive | 2075390 - 2075797 | 15212.2 |
| retron-type rna-directed dna polymerase | A33Q_2012 | Not Available | Positive | 2075944 - 2076207 | 10281.6 |
| hypothetical protein | A33Q_2013 | Not Available | Positive | 2076533 - 2076652 | 4468.35 |
| hypothetical protein | A33Q_2014 | Not Available | Negative | 2076846 - 2077253 | 15588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
