Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | A33Q_1995 | Not Available | Positive | 2044719 - 2046365 | 61487.3 |
| caax prenyl protease 1, putative | A33Q_1996 | Not Available | Negative | 2046435 - 2047667 | 46950.7 |
| hypothetical protein | A33Q_1997 | Not Available | Negative | 2047677 - 2048456 | 29199.8 |
| tonb-dependent receptor | A33Q_1998 | Not Available | Positive | 2048875 - 2054388 | 200381.0 |
| upf0246 protein yaaa | A33Q_1999 | Not Available | Positive | 2054399 - 2055142 | 28649.7 |
| hypothetical protein | A33Q_2000 | Not Available | Positive | 2055272 - 2058844 | 133314.0 |
| hypothetical protein | A33Q_2001 | Not Available | Positive | 2059093 - 2061702 | 95607.8 |
| hypothetical protein | A33Q_2002 | Not Available | Positive | 2061853 - 2063085 | 43926.1 |
| galactokinase | A33Q_2003 | Not Available | Negative | 2063158 - 2064303 | 42246.8 |
| aldose 1-epimerase | A33Q_2004 | Not Available | Negative | 2064300 - 2065370 | 39567.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
