Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin reductase | A33Q_1985 | Not Available | Positive | 2035461 - 2036126 | 25116.8 |
| transcriptional regulator, cro/ci family | A33Q_1986 | Not Available | Negative | 2036167 - 2036382 | 7886.8 |
| hypothetical protein | A33Q_1987 | Not Available | Negative | 2036386 - 2036946 | 21150.5 |
| hypothetical protein | A33Q_1988 | Not Available | Positive | 2037081 - 2037386 | 11772.4 |
| hypothetical protein | A33Q_1989 | Not Available | Negative | 2037601 - 2038653 | 39499.9 |
| dna polymerase, beta domain protein region | A33Q_1990 | Not Available | Negative | 2038773 - 2039075 | 11441.8 |
| hypothetical protein | A33Q_1991 | Not Available | Negative | 2039086 - 2039544 | 17794.0 |
| valyl-trna synthetase | A33Q_1992 | Not Available | Negative | 2039666 - 2042239 | 98116.3 |
| fumarylacetoacetase | A33Q_1993 | Not Available | Positive | 2042536 - 2043807 | 47760.9 |
| hypothetical protein | A33Q_1994 | Not Available | Negative | 2043867 - 2044511 | 24532.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
